Date
18 2016
Goals
- Hands-On experience on using science gateways
- Experience CIPRES, SEAGrid, NSG and Airavata Test-Drive Gateways.
- Insights from Gateways Experts
- Create an account on each Gateway
- Run simple jobs using each Gateway
- Learn Learn more about more the complex features/capabilities of each Gateway
Tutorial Agenda
ItemWho8:00 - 8:15 | Introduction: XSEDE16-GatewaysForNewUsers.pptx8:15 - 9:00 |
1.40 pm - 2.30 p- | CIPRES Gateway/NeuroScience Gateway
|
28 | Mark Miller/Amit Majumdar | |
Input - : Second Party Tree Viewer
|
Slides: MarkMiller_XSEDE2016_tutorial1b.pptx
9:00 - 9:45 | NeuroScience Gateway Overview: What does NSG do? Hands on: Download Jones model from ModelDB site, and run on Comet using the NEURON tool. How to use NSG - presentation Feedback/Questions
| Amit Majumdar | |
9:45 - 10:00 | Summary of Session 1 Summary and Preview of Session 2 | Marlon Pierce | |
10:00 - 10:303.00 pm - 3:30 pm | Break: Install Java and SEAGrid desktop client, create an account | | |
10 111530 pm | SEAGrid Gateway Overview Hands on Create accounts Simple file upload and submit jobs for Gamess and Gaussian CSD (crystal structure DB search) to create an input and use Nanocad and Gaussian GUI for further manipulation and submit a job. Use Jamberoo to edit structures and Gamess GUI and submit jobs. Use Jamberoo for Post Processing and Data Grid for automated post-processed data and web interface for sharing collaboratory. Feedback
| Sudhakar Pamidighantam | Useful links: Clients: Download - Mac, Linux and Windows clients available Mac Users: Use control-click-open to open the SEAGrid desktop client the first time. Inputs
|
11:15 - 11:45 | |
4.30 pm - 5.00 pm | Lightning Round: dREG, ChemCompute, and Campus Gateways |
PGA
Overview
Hands on: WRF
Feedback | 11:45 - 12:00 | Marlon Pierce | Slides |
4.50 pm - 5.00 pm | Closing remarks |
Summary and follow on: Bring us your Gateway needs!
Building science gateways with SciGaP tutorial preview
More about the XSEDE science gateways program
Science Gateway Institute: XSEDE16-SciGaP-Closing.pptx